Protein ZmGRAS39
ZmGRAS39 is a protein in the GRAS family.
Information
TF Name: ZmGRAS39
Species: Maize
TF Family: GRAS
Gene Name(Synonym): GRAS39
Uniprot ID: A0A1D6PDQ1

Protein ZmGRAS39

ZmGRAS39 is a protein in the GRAS family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF01926PF02421
Zm00001eb246430_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d017129DAPseq no logo sequence fimo position
Zm00001d017129DAPseq no logo sequence fimo position
Zm00001d017129ChIPseq no logo sequence fimo position
Zm00001d017129PChIPseq no logo sequence fimo position

Interactions where ZmGRAS39 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmGRAS39 is the target  
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There are 99 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb246430_T001 from maize genome v5

Amino Acid Sequence
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MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF01926
PF02421
PF02421
PF01926
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Nucleotide Sequence
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CCAAATCACTTATAAATACTATTAG...

GRMZM2G408012_T01 from maize genome v3

Amino Acid Sequence
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MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKAPMEAMELVVALTACADSVAACNHDVANYYLVRLGEMASPAGPTLMHRVAAYFVEVLTLRMVHAKAFK
FAKLHSKNMYQ

Nucleotide Sequence
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ATGGTGAAGAGAAGCAAGAAGAGCA...

GRMZM2G408012_T02 from maize genome v3


Related TFome: pUT6404

Amino Acid Sequence
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MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKISDPAPW

Nucleotide Sequence
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ATGGTGAAGAGAAGCAAGAAGAGCA...

Zm00001d017129_T001 from maize genome v4

Amino Acid Sequence
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MVKRSKKSKSKRVTLRQKHKVLRKVKEHDMEKMVTKADPSKRIVLLHNKIDLVPKEAVEKWLTYLREEMPTIAFKCNTQE
QRTKPGWKSSKLDKTNSIPQSSDCLGAENLIRLLKKYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGV
TRSMQEVQLDKKAPMEAMELVVALTACADSVAACNHDVANYYLVRLGEMASPAGPTLMHRVAAYFVEVLTLRMVHAKAFK
FAKLHSKNMYQ

Nucleotide Sequence
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GGTGCAATCCTTTTCATCCGCGAAC...

Zm00001d017129_T002 from maize genome v4

Amino Acid Sequence
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MGGSCSSRDGEQGQRRHADPRGTPPLPHHLRSPRATRSPRPRSLPQEWRRRRKRPNAASGNGRCVRGRRRRRLGSGRRGA
GSAARVLARRRIRELLRREGVGTNRESWSSGATTDEVGTQKGEGKKSRGAEHARTRMGGDGDKIWFHRSIAGTVQAAGSG
DGDEAEEEKAFLVPSAAAFPHGMSAAAAGPSLAVAKKEEFSKSPSNSPASSGGTDGGSSAVPWPEQIHAQNSSPTLLEPS
RQAIPLEFKSMAGCFFRLAEFYQDPEFGMLWQWKGLALASENQSA

Nucleotide Sequence
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GGTGCAATCCTTTTCATCCGCGAAC...

Zm00001d017129_T003 from maize genome v4

Amino Acid Sequence
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MGGDGDKIWFHRSIAGTVQAAGSGDGDEAEEEKAFLVPSAAAFPHGMSAAAAGPSLAVAKKEEFSKSPSNSPASSGGTDG
GSSAVPWPEQIHAQNSSQAPMEAMELVVALTACADSVAACNHDVANYYLVRLGEMASPAGPTLMHRVAAYFVEVLTLRMV
RMWPSRDLVIRFNSVVLVACGPAEI

Nucleotide Sequence
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GCTCTCTCCTGGCGCAATCCTCTCT...


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